epespad

Códigos de Openfile, por fin juntos, hecho por mi! Megapost

Bueno gente taringuera aca les traigo la lista completa del openfile 1dzd.hssp
Me pase mucho tiempo buscandola, pero al final logre juntar las partes y completarla.

HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 1.1 2001
PDBID 1DZD
DATE file generated on 2-May-11
SEQBASE UniProtKB/Swiss-Prot Release 2011_04 of 05-Apr-2011 + UniProtKB/TrEMBL Release 2011_04 of 05-Apr-2011
PARAMETER SMIN: -0.5 SMAX: 1.0
PARAMETER gap-open: 3.0 gap-elongation: 0.1
PARAMETER conservation weights: YES
PARAMETER InDels in secondary structure allowed: YES
PARAMETER alignments sorted according to: DISTANCE
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at www.CMBI.ru.nl by [email protected]
AVAILABLE Free academic use. Commercial users must apply for license.
AVAILABLE No inclusion in other databanks without permission.
HEADER GROWTH FACTOR
COMPND MOLECULE: ACIDIC FIBROBLAST GROWTH FACTOR;
SOURCE ORGANISM_SCIENTIFIC: HOMO SAPIENS;
AUTHOR R.M.LOZANO,A.PINEDA-LUCENA,C.GONZALEZ,M.A.JIMENEZ,P.CUEVAS,
S
181 88 138 2 rWSh
182 92 153 6 kRYRRGVr
184 6 91 1 gIg
185 89 135 14 yRTVSSTPGARRQPSa
186 90 147 4 kHVDTg
187 6 10 1 gIg
188 87 205 2 hNWk
189 92 101 6 kRHRKGVr
190 87 158 2 hNWk
191 87 208 2 hNWk
192 6 100 1 gIg
192 91 185 4 tEKTGr
192 117 215 2 iSTh
193 91 114 4 nDKNGr
194 6 100 1 gIg
194 91 185 4 tEKTGr
194 117 215 2 iSTh
195 6 100 1 gIg
195 91 185 4 tEKTGr
195 117 215 2 iSTh
196 89 154 14 yRTVPSGAGTKRKASa
197 89 154 14 yRTVPNGAGTKRKASa
198 89 153 14 yRTVPSGAGTKRKASa
199 89 154 14 yRTVPSGAGTKRKASa
200 6 100 1 gIg
200 91 185 4 tEKTGr
200 117 215 2 iSTh
201 87 349 2 tYNs
202 88 156 2 kWTh
204 91 29 4 tEKTGr
204 107 49 2 gCSp
205 93 137 2 gQPm
206 88 59 2 kWTh
207 91 159 2 nNGk
208 88 114 2 kWRh
209 87 169 2 lNWk
210 6 73 1 gIg
211 6 92 1 gIg
212 6 80 1 gIg
213 90 74 4 kHADTg
217 88 156 2 kWTh
218 88 156 2 kWTh
219 88 156 2 kWTh
220 88 156 2 kWTh
221 91 159 2 nNGk
222 88 156 2 kWTh
223 88 156 2 kWTh
224 88 156 2 kWTh
225 88 156 2 kWTh
226 90 165 2 mNKk
227 6 49 1 gIg
227 91 134 4 nRRSGr
227 115 162 2 qHVs
228 87 172 2 lNWk
229 91 25 4 tEKTGr
229 107 45 2 gCSp
230 6 92 1 gIg
231 6 97 1 gIg
231 91 182 4 tEKTGr
231 117 212 2 iSTh
232 65 75 15 vGVGLGVGVGVASQEHf
232 91 116 4 qTQSGr
233 6 97 1 gIg
233 91 182 4 tEKTGr
233 117 212 2 iSTh
234 90 165 2 mNKk
235 65 85 4 sIRREf
235 87 111 2 aMWk
236 5 54 3 dAQQt
236 67 118 1 dPe
237 88 156 2 kWTh
238 88 156 2 kWTh
239 91 165 4 qQESGr
240 91 165 4 qQESGr
241 88 156 2 kWTh
242 88 156 2 kWTh
244 66 140 8 gAPSPMELFt
244 91 173 4 qQESGr
245 6 51 1 gIg
245 91 136 4 nHRTGr
245 115 164 2 qHVs
246 6 22 1 gIg
247 6 8 1 gIg
248 90 104 4 kHGDTg
249 6 78 1 gIg
250 6 88 1 gIg
251 91 39 4 tEKTGr
251 117 69 2 iSTh
252 90 162 2 mNKk
258 6 32 1 gIg
259 91 170 4 qQESGr
260 91 129 4 qQESGr
261 91 165 4 qQESGr
262 91 165 4 qQESGr
263 91 165 4 qQESGr
264 88 156 2 kWTh
265 88 156 2 kWTh
266 91 170 4 qQESGr
267 92 63 2 nGGe
268 6 88 1 gIg
270 91 165 4 qSQSGr
271 91 366 2 nSRr
272 87 335 2 tYNs
273 87 322 2 tYNs
274 88 173 2 nWQh
275 91 52 2 nERr
277 91 29 4 tEKTGr
277 117 59 2 iSTh
278 91 29 4 tEKTGr
278 117 59 2 iSTh
279 91 29 4 tEKTGr
279 117 59 2 iSTh
280 90 248 2 rNGs
281 6 80 1 gIg
282 6 91 1 gIg
283 6 78 1 gIg
284 6 88 1 gIg
285 88 60 2 kWTh
286 90 152 2 kNNk
287 91 170 4 qQESGr
288 91 154 4 qQESGr
289 91 165 4 qTQSGr
290 88 156 2 kWTh
291 91 165 4 qTQSGr
292 88 77 2 kWRh
293 88 174 2 nWQh
294 88 174 2 nWQh
295 28 32 9 rPSPGLSQCTs
295 87 100 2 lRWk
296 5 54 3 dAQEt
296 108 151 1 pYr
297 88 158 2 kWRh
298 88 169 2 nWQh
299 88 176 2 nWQh
300 88 170 2 nWQh
301 88 176 2 nWQh
302 88 185 2 nWQh
303 88 169 2 nWQh
304 88 169 2 nWQh
305 88 169 2 nWQh
306 88 131 2 nWQh
308 34 88 11 fPVVYAVHSPFDr
308 57 122 1 dTg
308 90 156 6 lSDSGSTe
309 6 82 1 gIg
310 6 77 1 gIg
311 6 91 1 gIg
312 6 19 1 gIg
312 65 78 10 sIDAGPRLDGHy
313 87 169 4 mIYRQq
314 87 113 4 mIYRQq
315 87 159 4 mIYRQq
316 87 113 4 mIYRQq
317 87 113 4 mIYRQq
318 87 169 4 mIYRQq
319 87 146 4 mIYRQq
320 93 153 3 nHQRw
321 91 165 4 qTQSGr
322 28 15 1 ySi
323 87 127 1 iSn
324 90 252 2 rSGs
325 6 94 1 gIg
326 6 95 1 gIg
327 87 169 4 mIYRQq
328 87 101 4 mIYRQq
329 87 106 4 mIYRQq
330 87 106 4 mIYRQq
331 87 159 4 mIYRQq
332 87 97 4 mIYRQq
333 87 106 4 mIYRQq
334 87 159 4 mIYRQq
335 87 169 4 mIYRQq
336 87 159 4 mIYRQq
337 87 159 4 mIYRQq
338 87 159 4 mIYRQq
339 87 159 4 mIYRQq
340 87 175 4 mIYRQq
341 87 140 4 mIYRQq
342 87 169 4 mIYRQq
343 87 113 4 mIYRQq
344 87 159 4 mIYRQq
345 66 128 1 kLt
345 90 153 4 kHVDTg
346 5 54 3 dAQEt
346 67 118 1 dPk
347 93 96 2 gQPm
348 91 167 4 qQESGr
349 91 131 4 qQESGr
351 67 119 1 dPe
352 39 84 1 gSq
352 67 113 2 nRSd
353 87 88 4 aLYRQr
354 91 92 4 qQESGr
355 88 170 2 nWQh
357 65 120 1 sYs
359 6 94 1 gIg
367 6 95 1 gIg
368 67 140 18 qSDVLFESVKRGDMQEHFTp
368 87 178 4 mIYRQq
369 87 159 4 mIYRQq
370 87 150 4 mIYRQq
371 87 113 4 mIYRQq
372 87 169 4 mIYRQq
373 87 107 4 mIYRQq
374 87 113 4 mIYRQq
375 65 145 1 hLr
375 88 169 3 rYFMq
376 65 170 1 hLr
376 88 194 3 rYFMq
377 87 113 4 mIYRQq
378 65 139 1 hLr
378 88 163 3 rYFMq
379 87 160 4 mIYRQq
380 67 88 30 nPDASSDASGLCLGENRNPFVANCGIQKRRSe
380 92 143 3 gTRWr
381 64 89 1 aEt
382 65 90 1 eAp
383 66 131 1 kLt
383 90 156 4 kHVDTg
385 87 175 4 mIYRQq
386 5 54 3 dAQEt
386 67 118 1 dPv
388 91 167 4 qQESGr
389 91 167 4 qQESGr
390 91 167 4 qQESGr
391 91 105 4 qQESGr
392 91 118 4 qQESGr
393 91 167 4 qQESGr
394 91 105 4 qQESGr
395 91 105 4 qQESGr
396 91 105 4 qQESGr
397 91 105 4 qQESGr
399 5 47 2 tARt
399 67 110 1 sPe
400 91 311 2 nSLr
401 5 47 2 tARt
401 67 110 1 sPe
402 5 47 2 tARt
402 67 110 1 sPe
404 91 81 4 qQESGr
405 5 52 4 gPHGLs
405 65 115 1 qYs
406 65 40 1 sYs
407 5 44 2 tEWn
407 65 105 1 yFs
408 88 23 2 rWSt
408 115 52 3 kLSTn
409 65 104 1 iYt
410 6 94 1 gIg
411 103 132 9 tPRKLQISKSr
412 103 132 9 tPRKLQISKSr
413 6 94 1 gIg
414 6 94 1 gIg
415 103 132 9 tPRKLQISKSr
416 87 107 4 mIYRQq
417 87 161 4 aLYRQr
418 87 102 4 aLYRQr
419 17 105 15 tAEYEAKTNDLSRPEYv
419 67 170 2 nYSm
419 90 195 2 gTPk
420 67 120 1 nKe
421 67 120 1 nKe
422 67 120 1 nKe
423 5 53 3 dAQEt
423 67 117 1 dPe
424 91 109 4 qHESGr
425 91 170 4 qHESGr
426 93 35 4 eSGRAw
427 39 74 1 gSq
427 67 103 2 nRSa
428 28 247 12 yGQYTFYKEYYMEt
428 88 319 3 kYYKd
429 39 72 1 gSq
429 67 101 2 nRSa
430 5 53 4 rRFGHd
430 65 116 1 sYs
430 114 166 2 hFLp
431 91 75 4 qTQSGr
432 65 201 1 nYr
432 90 226 9 pGNRRRRRSKa
433 91 81 4 qQESGr
434 39 95 1 gSq
434 67 124 2 nRSa
435 91 39 4 qQESGr
436 91 39 4 qQESGr
437 14 89 9 pIENPDDGSTr
437 67 151 2 nYSt
437 92 178 2 rFNp
438 87 161 4 aLYRQr
439 87 161 4 aLYRQr
440 87 161 4 aLYRQr
441 87 139 4 aLYRQr
442 5 41 4 gPHGLs
442 65 104 1 qYs
443 6 92 1 gIg
444 6 94 1 gIg
445 6 81 1 gIg
446 27 57 1 nAd
446 103 133 9 tPRKLQISKGr
447 27 57 1 nAd
447 103 133 9 tPRKLQISKGr
448 6 94 1 gIg
449 6 90 1 gIg
450 6 81 1 gIg
451 91 29 4 qQESGr
452 27 103 27 dNSERRAAPAARPDADGPSHLRPSVCLLp
452 91 194 4 qHESGr
453 13 44 6 rHSNDDSr
453 90 127 4 kHPETq
454 13 44 6 rHSNDDSr
454 90 127 4 kHPETq
455 27 101 2 nVWm
456 65 105 1 iYt
457 39 95 1 gSq
457 64 121 2 kDSs
462 65 13 1 dGt
463 14 89 9 pIENEEDGSTr
463 67 151 2 nYSt
463 92 178 2 rINp
464 39 104 1 gSv
464 90 156 5 gHSGPEa
465 65 118 1 qYs
465 112 166 19 lSHFLPMLSTIPAEPEDLQEp
466 84 290 7 yAYKMPDSt
468 64 165 3 rVSEs
468 93 197 3 nPYDm
469 64 473 3 rVSEs
469 93 505 3 nPYDm
471 91 149 4 qQESGr
472 91 166 4 qQESGr
473 91 131 4 qHESGr
474 42 88 1 lAi
474 91 138 2 kNGr
475 65 102 1 hYs
476 90 75 2 sNDk
476 103 90 5 iPRKVQt
477 14 89 9 pYEDEEDGSTk
477 67 151 2 nFSt
477 93 179 3 eENPw
478 42 88 1 lAi
478 91 138 2 kNGr
479 91 166 4 qQESGr
480 90 24 2 gTPk
481 5 60 3 gPYVs
481 65 122 1 rYs
481 112 170 12 fIPVFHRSFFETGd
482 5 60 3 gPYVs
482 65 122 1 rYs
482 112 170 12 fIPIFHRSFFESTd
483 65 122 1 dGt
484 65 122 1 dGt
485 65 122 1 dGt
486 65 122 1 dGt
487 65 106 1 dGt
488 65 122 1 dGt
489 65 122 1 dGt
490 65 122 1 dGt
491 65 100 1 dGt
492 65 60 4 lRRAKh
493 87 301 8 kMPDSTNKRr
494 34 109 1 sLl
494 75 151 1 ePf
494 90 167 17 pHHKQGAQKRTSDLLYGHr
495 13 37 1 dRe
495 91 115 4 qLQSGr
496 91 68 4 qQESGr
498 91 115 4 qLQSGr
//

Espero les sirva.
Saludos y denle buen uso, no quiero que anden leyendo conversaciones ajenas!!
Tengan cuidado con chrome porque creo que tienen todo calculado con el 726t14p, yo por las dudas uso firefox.

1 comentario - Códigos de Openfile, por fin juntos, hecho por mi! Megapost

xluucia +1
Me explicas que carajo es esto? :/